To clarify how my network is working, I have 2 meraki MX64 (warm spare enabled) connected to two MS switches each is used for a certain VLAN (attached image); meaning that I have a switch used for vlan x.x and another for xx.x to separate LAN from WLAN, I can see that under Security & SD Wan -> Addressing & VLANs I have no Group policy assigned to those VLANs. However, if I assign a policy this will neglect the role of my AD to assign users to their groups. Meaning that all users on vlan x.x will have a group policy applied (everyone on this vlan without exception)
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